Reference

All functions

bayefdr-package bayefdr

The 'nibbles' package.

cumplot()

Plot the cumulative median, mean, and 95% high posterior density region.

efdr() efnr()

EFDR and EFNR estimation

efdr_search()

Bayesian EFDR optimisation.

optimal()

Retrieve the index of the optimal probability threshold.

plot(<bayefdr>)

Plot the EFDR, EFNR grids of a bayefdr object.

traceplot()

Trace, marginal density histogram, and autocorrelation plot of MCMC draws.

print(<bayefdr>) head(<bayefdr>)

Print methods for bayefdr objects.